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# Cohort Level Columns¶

**Hom Case**: number of cases hom
**Het Case**: number of cases het
**Hom Ref Case**: number of cases hom ref
**Hom Case Freq**: allele frequency of cases hom
**Het Case Freq**: allele frequency of cases het
**Hom Ctrl**: number of ctrls hom
**Het Ctrl**: number of ctrls het
**Hom Ref Ctrl**: number of ctrls hom ref
**Hom Ctrl Freq**: allele frequency of ctrls hom
**Het Ctrl Freq**: allele frequency of ctrls het
**QC Fail Case**: the number of case samples where the variant was called in the vcf but failed the required QC.
**QC Fail Ctrl**: the number of control samples where the variant was called in the vcf but failed the required QC.
**Covered Case**: the number of covered case samples.
**Covered Ctrl**: the number of covered control samples.
**Covered Case Percentage**: the percentage of covered case samples.
**Covered Ctrl Percentage**: the percentage of covered control samples.
**Case AF**: case allele frequency
**Ctrl AF**: ctrl allele frequency
**Case HWE_P**
**Ctrl HWE_P**

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